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7 protocols using anti egfr 1005

1

Inhibition of Immune Signaling Pathways

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Antibodies used in vitro were anti-EGFR (1005; Santa Cruz), anti-FasL (NOK1; BD Biosciences), anti-TLR2 (H 175; Santa Cruz), anti-TNFR1 (H-271; Santa Cruz) and anti-IL-16 (ab9563; Abcam). Respective IgG isotype controls were used for comparison; rabbit (2027; Santa Cruz) or mouse (2025; Santa Cruz). Inhibitors used were pancaspase inhibitor ZVAD-FMK (Santa Cruz), caspase-3 inhibitor (Calbiochem), caspase 1 inhibitor (Calbiochem), calpeptin (Calbiochem), BAPTA (Calbiochem) and EDTA (Sigma).
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2

EGFR Immunoprecipitation and Ubiquitination Analysis

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Immunoprecipitation assays were carried out as previously described [26 (link)]. In brief, treated cells were lysed with the RIPA buffer and protein concentrations were measured. One mg of protein per condition was incubated at 4 °C with anti-EGFR (R1, Santa Cruz) antibody and protein G-agarose (Roche) for 4 h. Beads were then washed 3 times with the YP-IP buffer (10 mM Tris-HCl pH 7.5, 0.1% Nonidet P-40, 150 mM NaCl), before immunoprecipitated proteins were eluted with 1.5 X SDS-PAGE loading buffer. Samples were further analyzed by immunoblotting with anti-EGFR (1005, Santa Cruz) and anti-Ubiquitin (P4G7, Covance) antibodies.
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3

Characterization of Vangl2 and Wnt Signaling

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HEK293T cells were from ATCC, and T98G, U87-MG, A1207, and U251 cells were gifts from Dr. Paul Knoepfler. T98G, U87-MG and U251 cells were authenticated by Arizona Research Labs (http://uagc.arl.arizona.edu/). Antibodies employed were anti-Vangl2 N-13, anti-Muc4 P-20, anti-Rac1, anti-EGFR (1005) from Santa Cruz, anti-FLAG M2, anti-tubulin, anti-actin AC-15 from Sigma, anti-HA 12CA5 for Ub-HA from Roche, anti-Myc 9E10 from Calbiochem, anti-V5 from Invitrogen, anti-RhoA from BD Biosciences, anti-FLRF/RNF41/Nrdp1 from Bethyl Laboratories, anti-HA C29F4 for Fzd7-HA western blots, anti-Dvl2, anti-phospho-JNK (T183/Y185), anti-phospho-Erk (T202/Y204), anti-phospho-Akt (S473), anti-phospho-β-catenin (Ser33/37/Thr41), anti-phospho-β-catenin (Ser552), and anti-β-catenin from Cell Signaling.
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4

Inhibition of Immune Signaling Pathways

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Antibodies used in vitro were anti-EGFR (1005; Santa Cruz), anti-FasL (NOK1; BD Biosciences), anti-TLR2 (H 175; Santa Cruz), anti-TNFR1 (H-271; Santa Cruz) and anti-IL-16 (ab9563; Abcam). Respective IgG isotype controls were used for comparison; rabbit (2027; Santa Cruz) or mouse (2025; Santa Cruz). Inhibitors used were pancaspase inhibitor ZVAD-FMK (Santa Cruz), caspase-3 inhibitor (Calbiochem), caspase 1 inhibitor (Calbiochem), calpeptin (Calbiochem), BAPTA (Calbiochem) and EDTA (Sigma).
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5

Characterization of Vangl2 and Wnt Signaling

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HEK293T cells were from ATCC, and T98G, U87-MG, A1207, and U251 cells were gifts from Dr. Paul Knoepfler. T98G, U87-MG and U251 cells were authenticated by Arizona Research Labs (http://uagc.arl.arizona.edu/). Antibodies employed were anti-Vangl2 N-13, anti-Muc4 P-20, anti-Rac1, anti-EGFR (1005) from Santa Cruz, anti-FLAG M2, anti-tubulin, anti-actin AC-15 from Sigma, anti-HA 12CA5 for Ub-HA from Roche, anti-Myc 9E10 from Calbiochem, anti-V5 from Invitrogen, anti-RhoA from BD Biosciences, anti-FLRF/RNF41/Nrdp1 from Bethyl Laboratories, anti-HA C29F4 for Fzd7-HA western blots, anti-Dvl2, anti-phospho-JNK (T183/Y185), anti-phospho-Erk (T202/Y204), anti-phospho-Akt (S473), anti-phospho-β-catenin (Ser33/37/Thr41), anti-phospho-β-catenin (Ser552), and anti-β-catenin from Cell Signaling.
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6

Antibody Validation for Immunoblotting and IF

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Antibodies for immunoblotting were from commercially available sources. anti-δ-catenin (#611537, BD Bioscience); anti-GFP (#G1544, Sigma); anti-p-Erk1/2 (#16982, Santa Cruz); anti-Erk1 (SC-94, Santa Cruz); anti-EGFR 1005 (#03, Santa Cruz); anti-EGFR (D20) (#31156, Santa Cruz) anti-E-cadherin (SC-7870, Santa Cruz); anti-py20 (SC-508, Santa Cruz) and anti-Myc-Tag (9B11) (#2276,Cell signaling).
Antibodies for immunofluorescence were also obtained commercially: anti-E-cadherin (#3195, Cell signaling), anti-EGFR 225 (MA5-12880, ThermoFisher Scientific).
Control siRNA and siRNA anti-δ-catenin were purchased from Sigma-Aldrich.
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7

Assaying Prostate Cancer Cell Markers

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Dihydrotestosterone (DHT) and anti-androgen bicalutamide were purchased from Sigma-Aldrich Co., LLC. (St. Louis, MO, USA). Recombinant human EGF, FGF-2, FGF-7, FGF-10, hepatocyte growth factor (HGF), IGF-1, transforming growth factor (TGF) β1, vascular endothelial growth factor (VEGF), and IL-6 were purchased from PeproTech, Inc. (Rocky Hill, NJ, USA). Rabbit polyclonal anti-PSA and mouse monoclonal anti-neuron-specific enolase (NSE; BBS/NC/V1-H14) antibodies were purchased from Dako Cytomation (Copenhagen, Denmark). Rabbit polyclonal anti-AR (N-20) and anti-EGFR (1005) antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Rabbit polyclonal anti-CD31 and anti-Ki-67 and rabbit monoclonal anti-AR splice variant 7 (AR-V7; EPR15656) antibodies were purchased from Abcam Inc. (Cambridge, MA, USA). Rabbit monoclonal anti-phospho-STAT3 (Tyr705) (D3A7), anti-STAT3 (D3Z2G), anti-phospho-Akt (Ser473) (D9E), and anti-Akt (pan) (C67E7) antibodies were purchased from Cell Signaling Technology, Inc. (Beverly, MA, USA). Rabbit polyclonal anti-p44/42 MAPK and mouse monoclonal anti-phospho-p44/42 MAPK (Thr202/Tyr204) (E10) antibodies were purchased from Cell Signaling Technology, Inc. Mouse monoclonal anti-β-actin (AC-15) antibodies were purchased from Sigma-Aldrich Co., LLC.
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