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13 protocols using dfc310

1

Electrophoretic Analysis of Protein Migration on Paper Strips

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The APTMS treated paper strip (see S1) was wetted by adding a few drops of LE from the LE side to make four-fifths of the paper wet. Then the strip was placed on the holder and both ends were dipped in reservoirs, which were filled with 300 μL of TE (on the left) and LE (on the right). The paper strip holder was secured on the stage of a Leica DM 2000 fluorescence microscope equipped with a DFC310 digital color camera (Leica Microsystems, Bannockburn, IL) underneath a 4× objective lens. The reservoirs and platinum wires were rinsed with DI water three times before the experiments started to reduce contamination. Protein labeled with a fluorophore was excited by UV light from a Leica Microsystems EL 6000 light source using an A-type filter cube. Platinum electrodes were dipped in the anode and cathode reservoirs, respectively. The anode reservoir voltage was set to 150 V, and the cathode reservoir was set to ground with an XHR 600–1 power supply (Xantrex Technology, Vancouver, Canada). Images were taken at various positions along the paper strip.
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2

Melittin Cytotoxicity Assay on Cells

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Glass coverslips were coated with poly-D-lysine at 1 mg/mL and cells were seeded overnight in complete RPMI media. Cells were treated with melittin at 0.5–20 μg/mL for either 1 minute, 15 minutes or 4 hours at 37 oC with 5% CO2. Samples were then incubated with a solution of 4 μM Ethidium homodimer (EthD-1) and 2 μM Calcein-AM in PBS for 45 minutes at room temperature (Invitrogen). Coverslips were mounted onto slides and examined by fluorescence microscopy for red (dead) and green (live) fluorescence. Samples were examined using a Leica DM2500 epifluorescence microscope with a DFC310 digital camera, and images were captured using LAS software (V4.1; Leica Microsystems).
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3

Quantifying Amyloid Load in Brain

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Photomicrographs of samples examined under an epifluorescent microscope (DMI6000B, Leica) were taken with a digital camera (DFC310 FX Leica), imported into ImageJ 1.45s software (NIH), and converted to black and white images. Threshold intensity was manually set and kept constant, and the number of pixels was determined for 82E1, 4G8, or hIAPP immunostained sections to quantify the amyloid load in hippocampal and cortical areas of the brain as well as in the Islets of Langerham. Burden was defined as the area labeled per total area analyzed. Amyloid plaque quantification was performed manually using the same software by calculating the area and the number of plaques per total analyzed area.
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4

Immunofluorescence Staining of Cell Markers

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Cultured cells were fixed for 10 min with 4% paraformaldehyde with/without permeabilization by 0.2% X-100 and blocked with 3% fetal bovine serum and 1% bovine serum albumin buffer for 1 h at room temperature. After blocking, cells were incubated with anti-GnRH-R (1:100, Cat: NBP2–45300-0.1mg; Novus Biologicals, Littleton, CO, USA), anti- E-cadherin (1:1,000, Cat: 3195s, Cell Signaling Technology), anti-RAD 51 (1:10,000, Cat: ab133534, Abcam), or anti-γH2AX (1:800, Cat: 2577s; Cell Signaling Technology) at 4 °C overnight. After washing with PBS three times, cells were incubated with Alexa 488- or 564-labeled secondary antibodies (1:250 in blocking buffer; Jackson ImmunoResearch Laboratories) as recommended by the manufacturer. Nuclear staining was achieved using Hoechst 33258 (1:10,000; Invitrogen, Darmstadt, Germany). ProLong® Diamond Antifade Mountant (Thermo Fisher Scientific) was then used to mount the stained cells on slides, which were covered with new, clean coverslips. The fluorescence signal was imaged under a Leica DM4000 B LED microscope with a Leica DFC310 digital camera or a laser scanning multiphoton confocal microscope (TCS SP5 MP; Leica Microsystems, Buffalo Grove, IL). All experimental groups were analyzed with the same settings.
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5

Paraformaldehyde Fixation and PAS Staining

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The cells were fixed by 4% paraformaldehyde, stained by PAS according to the manufacturer's protocols (Solarbio, G1280) and then observed under a light microscope (Leica DFC 310) [17] .
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6

Neuronal Apoptosis and Cellular Markers

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6 rats of each group were sacrificed for brain slices of 8 μm. TUNEL stain was followed by the direction of the kit. Pictures were analyzed by IPP. Then, apoptotic rate = the number of the TUNEL+ cells / the total number of cells ×100%.
Immunofluorescence was performed as described below. Briefly, slices were blocked by 5% BSA in 37℃ for 1 hour, and then respectively incubated with primary anti-bodies of NF200 (1:200), GFAP (1:200) and vWF(1:200) in 4℃ overnight. After washed with PBS for 3×5 min, slices were incubated with the secondary anti-bodies and DAPI in dark. Pictures were captured by a fluorescence microscope (DFC310, Leica, Germany) and then analyzed by IPP. Specifically, the average of fluorescence density = the total value of fluorescence / the number of cells.
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7

Zebrafish Cardiac Morphology Quantification

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Zebrafish hearts at 72 h post fertilization (hpf) were recorded using a Leica digital camera (DFC 310 for colour images and DFC 365 FX for fluorescence images) on a fluorescence stereomicroscope M205A (Leica, Wetzlar, Germany). Cardiac morphologies such as ventricular area, atrial size, and pericardial sac area were quantified with LAS AF software (version 3.1.0; Leica). The end-diastolic ventricular dimension was measured at its largest point. Ventricular fractional shortening was evaluated with recorded movies converted to M-mode images using the original software31 (link),33 (link).
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8

Body Length Measurement and Lifespan Assay

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For body length measurements, synchronized L1 larvae were placed on NGM agar plates with fath-1 RNAi bacteria or HT115 control and allowed to grow until control group reached young adult stage. Bright-field images of the worms on plates were taken using OLYMPUS SZX16 stereomicroscope fitted with a LEICA DFC310 camera. The body length of each individual was measured from the nose to the tail tip using ImageJ software. At least 40 individuals were examined per treatment group. The life-span assay was performed essentially as previously described [28 (link)]. At least 50 individuals were examined per treatment group.
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9

Quantifying Amyloid Load in Brain

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Photomicrographs of samples examined under an epifluorescent microscope (DMI6000B, Leica) were taken with a digital camera (DFC310 FX Leica), imported into ImageJ 1.45s software (NIH), and converted to black and white images. Threshold intensity was manually set and kept constant, and the number of pixels was determined for 82E1, 4G8, or hIAPP immunostained sections to quantify the amyloid load in hippocampal and cortical areas of the brain as well as in the Islets of Langerham. Burden was defined as the area labeled per total area analyzed. Amyloid plaque quantification was performed manually using the same software by calculating the area and the number of plaques per total analyzed area.
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10

Fluorescent Imaging of Insect Development

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The patterns of eGFP, dsRed and eCFP expression were determined by microscopic observations of larvae, pupae, and adults using a fluorescent dissecting microscope equipped with optical filters for Cy3, eGFP, and simultaneous visualization of both colors. The evaluation of eGFP expression in CA was performed on unfixed preparations using a DM 5500 B Leica fluorescence microscope with a Leica DFC 310 FX mounted camera and Leica LAS imaging software. Autofluorescence was detected neither in the CA of WT nor in most cells of the CA of mutants.
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