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Amicon ultra 0.5 ml 3k centrifugal filters

Manufactured by Merck Group

The Amicon Ultra-0.5 ml (3K) centrifugal filters are a type of laboratory equipment designed for the separation and concentration of macromolecules. The filters have a molecular weight cutoff of 3,000 Daltons, allowing the efficient retention of molecules larger than this size during the centrifugation process.

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2 protocols using amicon ultra 0.5 ml 3k centrifugal filters

1

Purification of Di-sialylated IgGs

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SNA Sepharose (Glycodiag, Orléans, France) was washed thrice with 50 mM Tris-HCl, 150 mM NaCl buffer pH 7.5 (TBS) and CaCl2 1 mM. A 10-fold concentrated Ca-containing TBS buffer pH7.5 (500 mM Tris-HCL, 1.5M NaCl and CaCl2 10 mM) was diluted 1:10 in the 420 μL fraction containing the total purified IgGs and the solution was added to the SNA Sepharose gel and incubated overnight at 4°C. The gel was then centrifuged at 8,000 × g for 5 min. Di-sialylated IgGs were then eluted by adding 100 mM glycine pH 2.8 for 5 min and the eluate was recovered by centrifugation at 10,000 × g for 5 min and immediately neutralized at pH 7.4 with 1M Tris-HCl pH 9.0. A second elution was performed to ensure the recovering of total di-sialylated IgGs (23 (link)) bound to the gel. Both elutions were pooled and the protein content was estimated by spectrophotometry at 280 nm using nanodrop ND-1000 (Wilmingto, DE, USA). The flow-through (i.e., un/mono-sialylated fraction) and the elution fraction (i.e., di-sialylated fraction) for each purified patient serum were then dialyzed against PBS and concentrated on an Amicon Ultra-0.5 ml (3K) centrifugal filters (Millipore, Tullagreen, IRL) as recommended by the manufacturer. Each concentrated fraction was adjusted to the same final volume.
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2

Proteomic Analysis of Hepsin Overexpression

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Culture supernatants were concentrated with Amicon Ultra‐0.5 ml 3 K Centrifugal Filters according to the manufacturer’s instructions (Millipore). Lysates and supernatants were boiled with lysis buffer with (R)/without β‐mercaptoethanol (NR) and separated on gradient gels (Bio‐Rad).
Gels were stained o/n RT with Coomassie stain (10% acetic acid, 50% ethanol, Coomassie Brilliant Blue‐R250 in MQ), followed by destaining (10% acetic acid, 50% ethanol in MQ).
Bands that were altered by hepsin overexpression (DOX/DOX+) were excised and analyzed by MALDI‐TOF as described before (Vaarala et al, 2014 (link)), and the results were plotted against the proteome of the Mammalian taxon (66651 sequences). Mass spectrometric analysis was performed by the Meilahti Clinical Proteomics Core Facility.
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