The largest database of trusted experimental protocols

7 protocols using glass culture slides

1

Immunofluorescence Analysis of Epithelial-Mesenchymal Transition

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown on glass culture slides (BD Biosciences) and fixed with 4% cold methanol at −20 °C for 10 minutes. Subsequently, cells were blocked with 10 % goat serum for 1 hour and incubated with primary antibodies against E-cadherin (24E10, 1:200, Cell Signaling), N-cadherin (1:100, BD Biosciences) and Vimentin (D21H3, 1:100, Cell Signaling) at 4 °C for 1 hour and then incubated with Rhodamine Red or Alexa Fluor 488 labeled secondary antibody (Invitrogen) for 1 hour at room temperature. After counterstained with DAPI (Invitrogen), the slide was observed under a confocal microscope (Zeiss).
+ Open protocol
+ Expand
2

Immunohistochemistry and Immunofluorescence Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunohistochemistry, sections were incubated with antibody against p-STAT3 (Tyr 705, Cell Signaling Technology, Danvers, MA) and β-catenin (Cell Signaling Technology), followed by incubation with secondary antibodies. Expression levels were visualized and classified as previously described [47 (link)]. For immunofluorescence, cells were grown on glass culture slides (BD Biosciences) and fixed with 4% cold methanol at -20°C for 10 min. Subsequently, cells were blocked with 10% goat serum for 1 h and incubated with primary antibodies against β-catenin (Cell Signaling Technology) at 4 °C for 1 h and then incubated with florescent labeled secondary antibodies for 1h at room temperature. After counterstained with DAPI (Invitrogen), the slide was observed under a confocal microscope (Zeiss).
+ Open protocol
+ Expand
3

Immunofluorescence Analysis of Epithelial-Mesenchymal Transition

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown on glass culture slides (BD Biosciences) and fixed with 4% cold methanol at −20 °C for 10 minutes. Subsequently, cells were blocked with 10 % goat serum for 1 hour and incubated with primary antibodies against E-cadherin (24E10, 1:200, Cell Signaling), N-cadherin (1:100, BD Biosciences) and Vimentin (D21H3, 1:100, Cell Signaling) at 4 °C for 1 hour and then incubated with Rhodamine Red or Alexa Fluor 488 labeled secondary antibody (Invitrogen) for 1 hour at room temperature. After counterstained with DAPI (Invitrogen), the slide was observed under a confocal microscope (Zeiss).
+ Open protocol
+ Expand
4

Immunofluorescence Staining of YAP, TAZ, and Actin

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded on glass culture slides (BD Biosciences) and fixed with 4% cold methanol at − 20 °C for 10 min. Subsequently, cells were blocked with 10% goat serum for 1 h and incubated with primary antibodies against YAP (Cell Signaling Technology, Cat. 14,074), TAZ (Abcam, Cat. ab224239) or Phalloidin-iFluor 488 Reagent - CytoPainter (Abcam, Cat. ab176753) at room temperature for 2 h and then incubated with secondary antibody FITC for 1 h at room temperature. After counterstained with DAPI (Invitrogen), the slide was observed under a confocal microscope (Zeiss).
+ Open protocol
+ Expand
5

Immunofluorescence Staining of β-catenin and RAI2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were grown on glass culture slides (BD Biosciences, San Jose, USA) and fixed with 4% cold methanol at -20°C for 10 min. Subsequently, cells were blocked with 10% goat serum for 1 h and incubated with primary antibodies against β-catenin (ab32572, Abcam, Cambridge, UK, 1:250) or RAI2 (PA5-62305 Invitrogen, CA, USA, 1:500) at 4°C for 1 h and then incubated with fluorescent labeled secondary antibodies for 1h at room temperature. After being counterstained with DAPI (Invitrogen, CA, USA), the slide was observed under a confocal microscope (Zeiss).
+ Open protocol
+ Expand
6

Immunofluorescence Visualization of Cellular Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded at 0.7–2.5 × 104 cells/1.7 cm2 well of glass culture slides (BD Falcon, Bedford, USA). Cells were transfected as previously described. The cells were fixed in 4% parafomaldehyde (Sigma-Aldrich, Steinheim, Germany), in PBS for 20 min. The cells were then permeabilized in 0.5% Triton X-100 in PBS for 5 min, washed in PBS and blocked in blocking solution (1% BSA, 10% donkey serum [both from Sigma, St. Louis, USA] in PBS) for 1 h at RT. Transfected proteins and cell organelles were stained with appropriate antibodies or counter stains according to manufacturer’s protocol. Antibodies and co-stains were as follows: mouse anti-EGFR (GR01L, 1:1000, Merck-Calbiochem, Darmstadt, Germany), mouse anti-transferrin receptor (1:100, Invitrogen, Camarillo, USA), donkey anti-mouse Alexa Fluor 488 (1:200, Invitrogen-Molecular Probes, Eugene, USA). The slides were sealed with a coverslip and Prolong Gold antifade mounting media with DAPI (Life Technologies-Molecular Probes, Eugene, USA). Slides were viewed on a Leica SP8 Confocal Microscope. Fluorescent images were captured with a 63x lens zoomed 1-4x with a 1024 × 1024 frame and 400 Hz scanning speed. Images were analyzed using Leica LAS X software. The images presented in the same figures were captured using standardized setting and exposure times.
+ Open protocol
+ Expand
7

Cytoskeleton and Protein Localization Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were seeded on glass culture slides (BD Falcon, Franklin Lakes, New Jersey, USA) and cultured for 24 h. Subsequently, they were fixed with 4% paraformaldehyde, permeabilized with 0.25% Triton X‐100, and blocked with 1% BSA. For cytoskeleton detection, F‐actin was detected with phalloidin‐Alexa Fluor 488 (Thermo Fisher Scientific, Carlsbad, California, USA). For the detection of protein localization, immunostaining was performed with FLAG (1:100), ARHGAP35 (1:100), and TFII‐I (1:100) primary antibodies, and subsequently the appropriate secondary antibodies. The nuclei were stained with 4′,6‐diamidino‐2‐phenylindole (DAPI) (Thermo Fisher Scientific). Images were acquired using an Olympus FluoView FV1000 confocal microscope.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!