RNAi experiments were conducted using RNAi MAX transfection reagent (Invitrogen) according to the manufacturer’s guidelines. Pools of 4 pre-designed siRNAs against LGN-GPMS2 (GAACUAACAGCACGACUUA, CUUCAGGGAUGCAGUUAUA, ACAGUGAAAUUCUUGCUAA, UGAAGGGUUCUUUGACUUA), p150-DCTN1 (CUGGAGCGUGUAUCGUAA, GAAGAUCGAGAGACAGUUA, GCUCAUGCCUCGUCUCAUU, CGAGCUCACUACUGACUUA), DHC-DYNC1H1 (GAUCAAACAUGACGGAAUU, CAGAACAUCUCACCGGAUA, GAAAUCAACUUGCCAGAUA, GCAAGAAUGUCGCUAAAUU), siRNAs targeting NuMA (GGCGUGGCAGGAGAAGUUCUU)9 (link) the three Gαi isoforms (CCGAAUGCAUGAAGCAUGUU, CUUGAGCGCCUAUGACUUGUU)8 (link), and a non-targeting control were obtained from Dharmacon. For RNAi rescue experiments withLGN, a single siRNA (GAACUAACAGCACGACUUA) was used and target sequence on the plasmid was mutated to be insensitive to this siRNA.
Cell Line Maintenance and Genetic Manipulation
Partial Protocol Preview
This section provides a glimpse into the protocol.
The remaining content is hidden due to licensing restrictions, but the full text is available at the following link:
Access Free Full Text.
Corresponding Organization :
Other organizations : Whitehead Institute for Biomedical Research
Protocol cited in 8 other protocols
Variable analysis
- Inactivation of RCC1 by culturing tsBN2 cells at 39.7°C for 1.5-3 hrs
- Transient transfection of mCherry-Ran T24N and mCherry-membrane targeting constructs
- Generation of NuMA NLS mutant by removing the NLS sequence QQRKR
- Drug treatments on HeLa cells: STLC (10 μM), Nocodazole (100 nM high dose, 10-20 nM low dose), ZM447439 (2 μM), BI2536 (10 μM), MG132 (20 μM), Thymidine (2 mM)
- RNAi experiments using siRNA pools against LGN-GPMS2, p150-DCTN1, DHC-DYNC1H1, NuMA, and the three Gαi isoforms
- RNAi rescue experiments with LGN using a single siRNA (GAACUAACAGCACGACUUA) and a mutated target sequence on the plasmid
- Not explicitly mentioned
- HeLa cells, Rpe1 cells, and tsBN2 cells were maintained as described previously
- Clonal cell lines stably expressing GFP^LAP fusions were generated as described previously
- HeLa cells expressing mouse DHC-GFP were obtained from MitoCheck
- GFP-LGN and DHC-GFP cell lines functionally complement depletion of the corresponding endogenous protein based on dynein recruitment and spindle orientation, respectively
- GFP-LGN and DHC-GFP cell lines functionally complement depletion of the corresponding endogenous protein
- Non-targeting control siRNA
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!