Genome Sequencing of Deep-Sea Fungus D. cejpii FS110
Corresponding Organization : Institute of Microbiology
Variable analysis
- Isolation of the strain D. cejpii FS110 from a deep-sea sedimental sample in the South China Sea
- Incubation of single colonies on a potato dextrose agar medium for five days at 30 °C
- Total genome DNA extraction of D. cejpii FS110
- Genome DNA quality assessment using TBS-380 (OD260/280 = 1.8–2.0, >10 μg)
- Construction of a genome library by breaking the purified genome DNA into short fragments
- Illumina sequencing (Illumina HiSeq Xten) and Pacific Biosciences sequencing (Pacific Biosciences RS) of the genome library fragments
- Assembly of the Illumina and PacBio reads into a complete genome sequence using SOAP denovo v2.04
- Manufacturer's protocols followed for Charge Switch gDNA Mini Bacteria Kit, Illumina sequencing, and Pacific Biosciences sequencing
- No positive or negative controls were explicitly mentioned in the input protocol.
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