High-Throughput Antibody Repertoire Sequencing
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Corresponding Organization : University of Colorado Denver
Other organizations : VA Palo Alto Health Care System, Stanford University, Colorado School of Public Health, University of Colorado Anschutz Medical Campus
Protocol cited in 2 other protocols
Variable analysis
- Antibody repertoire sequencing protocol
- Antibody sequences
- Lysis buffer (10mM Tris with 1U/μL RiboLock RNAse inhibitor)
- Well ID-tagged cDNA
- Plate-specific indices added during PCR
- Gamma, Kappa, and Lambda primers as described in (23)
- Nested Alpha gene-specific primer sequences
- Barcoded amplicons from multiple plates
- Roche 454 sequencing using Lib-L adaptors and Titanium chemistry
- Illumina MiSeq 2 × 300 analysis
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