On the confocal images processed with Fiji (ImageJ v. 1.53q), RBPMS- and NeuN-positive cells were automatically counted with the ‘analyze particles’ plugin. The cells were manually counted by two different users, with the ‘cell counter’ plugin. Quantification was performed by acquiring confocal stacks in at least four randomly chosen transfected regions of 0.4 mm2 (Extended Data Fig.
Immunostaining for Retina and Brain Neurons
On the confocal images processed with Fiji (ImageJ v. 1.53q), RBPMS- and NeuN-positive cells were automatically counted with the ‘analyze particles’ plugin. The cells were manually counted by two different users, with the ‘cell counter’ plugin. Quantification was performed by acquiring confocal stacks in at least four randomly chosen transfected regions of 0.4 mm2 (Extended Data Fig.
Corresponding Organization :
Other organizations : Institut de la Vision, Inserm, Sorbonne Université, Centre National de la Recherche Scientifique, ESPCI Paris, Université Paris Sciences et Lettres, Institute of Molecular and Clinical Ophthalmology Basel, University of Pittsburgh
Variable analysis
- Incubation of samples overnight at 4 °C with a monoclonal anti-RBPMS antibody (1:500, rabbit; ABN1362, Merck Millipore) for the retina
- Incubation of samples with a monoclonal anti-NeuN antibody (1:500, mouse, clone A60; MAB377, Merck Millipore) for brain sections
- RBPMS- and NeuN-positive cells automatically counted with the 'analyze particles' plugin on the confocal images processed with Fiji (ImageJ v. 1.53q)
- RBPMS- and NeuN-positive cells manually counted by two different users, with the 'cell counter' plugin on the confocal images processed with Fiji (ImageJ v. 1.53q)
- Incubation of samples with secondary antibodies conjugated with Alexa Fluor 488 (1:500, donkey anti-mouse and donkey anti-rabbit IgG 488, polyclonal; A-21202 and A-21206, Invitrogen, respectively) and DAPI (1:1,000; D9542, Merck Millipore) for 1 h at room temperature
- Acquisition of confocal images of flat-mounted retinas and brain sections using an Olympus FV1000 confocal microscope with ×20 objective (UPLSAPO 20XO with a numerical aperture of 0.85) and FV10-ASW v. 4.2 software
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