A combination of ex vivo and in vivo imaging of murine skin were performed. For in vivo imaging, mice were anesthetized with Ketamine/Xylazine (80/10mg/kg, i.p.) with repeated half-doses as required. The anesthetized mouse was mounted on a custom-built ear stage with its body temperature controlled as described previously (Ng et al., 2008 (link); Li et al., 2012 (link)). MPM was performed on a custom-built TriMScope (LaVision BioTec, Bielefeld, Germany) attached to an Olympus BX-51 fixed stage microscope equipped with either a 16× (Nikon LWD, NA 0.80; Nikon, Tokyo, Japan) or 20× (Olympus XLUMPlanFl IR coated, numerical aperture (NA) 0.95; Olympus, Center Valley, PA) water immersion objective. For ex vivo imaging, mice were euthanized using CO2 asphyxiation, hair removed with Nair, and tissue harvested from the ear, dorsal back, footpad and tail skin. A wideband mode-locked Ti:sapphire femtosecond laser (Mai Tai HP/Spectra-Physics; Newport Corporation, Irvine, CA) was used to excite the skin at a wavelength of 920 nm or 940 nm for imaging of GFP and YFP respectively. Blood vessels were visualized through i.v. (tail vein) injection of Evans blue (Gurr-Searle Diagnostic) conjugated to BSA (Abtin et al., 2014 (link)).