LC-HRMS Metabolite Profiling Protocol
Corresponding Organization :
Other organizations : Cancer Research UK, Cancer Research UK Scotland Institute, University of Glasgow, Cold Spring Harbor Laboratory
Variable analysis
- Mobile phase composition (aqueous solution of ammonium carbonate (20 mM, pH 9.2) (A) and acetonitrile (B))
- Gradient profile (linear increase of A from 20 to 80% at 0 to 30 min, 92% A 31–37 min and linear decrease of A to 20% at 37–46 min)
- Metabolite peak areas
- Accela 600 LC system (Thermo Fisher Scientific) coupled to an Exactive (Orbitrap) mass spectrometer (Thermo Fisher Scientific)
- SeQuant ZIC-pHILIC column (4.6 mm × 150 mm, 5 μm) (Merck)
- Injection volume (20 µL)
- Sample temperature (4 °C)
- Mass spectrometer settings (positive and negative electrospray ionisation (ESI) modes, full-scan mode over a mass range of m/z 70–1200 at a resolution of 50,000, capillary temperature of 320 °C, sheath and auxiliary gas flow rates of 50 and 17 units, respectively)
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