Comprehensive Cancer Genomic Profiling
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Corresponding Organization :
Other organizations : Shizuoka Cancer Center
Variable analysis
- DNA and RNA isolation
- GEP and WES analyses
- Microarray analysis
- Somatic mutations
- Mutations in 138 known driver genes
- Single nucleotide variants (SNVs) of the total exonic mutations for each sequenced tumor
- RNA samples with an RNA integrity number ≥6.0 used for microarray analysis
- Microarray analysis performed in accordance with the MIAME guidelines
- Comparison of data from tumor and corresponding blood samples for identification of somatic mutations
- 138 known driver genes defined as those identified as pathogenic in the ClinVar database
- Positive control: Not explicitly mentioned.
- Negative control: Not explicitly mentioned.
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