For metabolomics, cell samples (morphine exposure: 0, 5 and 50 μM) were prepared based on Meister et al. [15 (link)] work, as described in
Proteomics and Metabolomics of Morphine Exposure
For metabolomics, cell samples (morphine exposure: 0, 5 and 50 μM) were prepared based on Meister et al. [15 (link)] work, as described in
Corresponding Organization : University of Geneva
Other organizations : HES-SO University of Applied Sciences and Arts Western Switzerland, Universidade Federal de São Carlos
Variable analysis
- Morphine concentration (0, 1, 10, 25, 50, 100 μM) for proteomics experiments
- Morphine exposure (0, 5, 50 μM) for metabolomics experiments
- Protein expression/abundance measured by proteomics
- Metabolite levels measured by metabolomics
- Protein amount (10 μg) used for each sample
- TCEP reduction (final concentration 5 mM, 30 min, 37 °C)
- Iodoacetamide alkylation (final concentration 15 mM, 60 min, RT, in dark conditions)
- Tryptic digestion (w/w ratio 1:50, overnight)
- RapiGest surfactant cleavage (0.5% trifluoacetic acid, 45 min, 37 °C)
- C18 reverse phase desalting of peptides
- Peptide resuspension (5% ACN 0.1% FA, 0.5 μg/μL)
- Spiking of iRT peptide (1:20)
Annotations
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