The three-dimensional segmentation of the ATs were performed with the software Amira-Aviso 6.7 (Thermo Fisher Scientific, Waltham, MA, USA) and exported as stereolithography (STL) files for numerical modelling using established protocols [12 (link),14 (link)]. The segmented images were also used for obtaining the AT cross-sectional radius, length and volume measurements through the Center Line Tree module in AMIRA. For the two-dimensional measurement of spiracle size, an Alicona InfiniteFocus microscope (G5, Bruker Alicona Imaging, Graz, Austria) at ×5 objective magnification was used, with a resolution of about 100 nm.
3D Geometry of Ant Thorax via μ-CT Scanning
The three-dimensional segmentation of the ATs were performed with the software Amira-Aviso 6.7 (Thermo Fisher Scientific, Waltham, MA, USA) and exported as stereolithography (STL) files for numerical modelling using established protocols [12 (link),14 (link)]. The segmented images were also used for obtaining the AT cross-sectional radius, length and volume measurements through the Center Line Tree module in AMIRA. For the two-dimensional measurement of spiracle size, an Alicona InfiniteFocus microscope (G5, Bruker Alicona Imaging, Graz, Austria) at ×5 objective magnification was used, with a resolution of about 100 nm.
Corresponding Organization : University of Lincoln
Other organizations : Instituto Tecnológico de Ciudad Madero, Tecnológico Nacional de México
Variable analysis
- X-ray μ-CT scanning resolution (12.9 μm)
- X-ray source voltage (50 kV)
- X-ray source current (200 μA)
- X-ray exposure time (200 ms)
- X-ray rotation steps (0.2°)
- Precise three-dimensional geometry of the AT
- AT cross-sectional radius
- AT length
- AT volume
- Spiracle size
- Scanning of six AT samples (three male and three female P. cieloi)
- Use of SkyScan 1172 X-ray μ-CT scanner
- Use of NRecon software for reconstruction of μ-CT projection images
- Use of Amira-Aviso 6.7 software for three-dimensional segmentation of ATs
- Use of Alicona InfiniteFocus microscope for two-dimensional measurement of spiracle size
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