Transcriptome Analysis of BnGR2R3-MYB Genes

Transcriptome data of 9 samples comprising phloem, root and leaf tissues as well as, developmental periods and growth condition (hydroponics or terrestrial) obtained from Genome Sequence Archive database were used. Transcript abundance of the BnGR2R3-MYB genes was calculated as fragments per kilobase of exon model per million mapped reads (FPKM). Log2(FPKM +1) values were displayed according to the color code. Detailed FPKM values were listed in Supplementary Table S7.

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Feng X., Abubakar A.S., Chen K., Yu C., Zhu A., Chen J., Gao G., Wang X., Mou P, & Chen P. (2023). Genome-wide analysis of R2R3-MYB transcription factors in Boehmeria nivea (L.) gaudich revealed potential cadmium tolerance and anthocyanin biosynthesis genes. Frontiers in Genetics, 14, 1080909.

Publication 2023

Exon Genome Growth condition Leaf Myb genes Phloem Root Tissues Transcriptome

Corresponding Organization : Chinese Academy of Agricultural Sciences

Other organizations : Bayero University Kano

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Variable analysis

independent variables

Tissue type (phloem, root, leaf)
Developmental period
Growth condition (hydroponics or terrestrial)

dependent variables

Transcript abundance of the BnGR2R3-MYB genes (FPKM)

control variables

Not explicitly mentioned

controls

No positive or negative controls were mentioned in the provided information.

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