TCGA-CESC RNA-seq Gene Expression Analysis

The TCGA-CESC (The Cancer Genome Atlas-Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma) project's massive RNA-sequencing gene expression matrix was retrieved from the UCSC Xena project (http://xena.ucsc.edu) [29 (link), 30 (link)]. The platform used in this assay was Illumina Hiseq Rnaseqv2 Platform and detected 308 samples with 20531 identifiers (version 2018-09-03). Also, the clinical information of these samples is obtained from corresponding TCGA-CESC curated survival (version 2018-09-03) and phenotype data (version 2019-12-06) and utilized in the study [31 (link)].

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Jiang Y, & Chen S. (2022). Functional New Transcription Factors (TFs) Associated with Cervical Cancer. Journal of Healthcare Engineering, 2022, 8381559.

Publication 2022

Hiseq Rnaseqv2 Platform

Adenocarcinoma Assay Cancer Cervical Endocervical Gene expression Genome Phenotype Squamous cell carcinoma

Corresponding Organization : First People's Hospital of Chongqing

Other organizations : Chengdu Third People's Hospital

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independent variables

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dependent variables

The gene expression levels of 20531 identifiers detected in 308 samples.

control variables

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controls

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