Genomic Profiling of Tissue and Blood Samples
Corresponding Organization :
Other organizations : Cancer Research UK, University of Cambridge, Karolinska Institutet, University of Oxford, University College London, University of East Anglia, Norwich Research Park, Addenbrooke's Hospital, Prostate Cancer Research, Institute of Cancer Research, Prostate Cancer UK, University of Oslo, Oslo University Hospital
Protocol cited in 2 other protocols
Variable analysis
- Tissue sample type (gDNA and total mRNA extracted from tissue samples, gDNA from whole blood)
- Gene expression (mRNA profiled on Illumina HT12 v4 BeadChip arrays)
- Genetic variation (gDNA assayed on Illumina HumanOmni2.5–8 M bead chip arrays and Affymetrix SNP6 arrays)
- Extraction method (Qiagen AllPrep for tissue samples, Tepnel for whole blood samples)
- Microarray platforms (Illumina HumanOmni2.5–8 M bead chip arrays, Affymetrix SNP6 arrays, Illumina HT12 v4 BeadChip arrays)
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