Western Blot Analysis of RNAi Pathway Proteins
Corresponding Organization : Osaka University
Variable analysis
- Denaturation of protein samples by boiling at 95°C for 3 min in protein-loading buffer
- Resolved proteins by SDS-PAGE
- Protein levels detected by immunoblotting with various antibodies
- Protein-loading buffer composition (2% (w/v) SDS, 100 mM DTT, 0.05% (v/v) BPB, and 10% (v/v) glycerol)
- Transfer of resolved proteins to 0.2-μm polyvinylidene difluoride membrane using the semi-dry system
- Blocking of membrane in 4% (w/v) skim milk in 1× phosphate-buffered saline supplemented with 0.1% (v/v) Tween 20
- Incubation of membrane with various primary antibodies (anti-Aub, anti-GFP, anti-Ago1, anti-Ago2, anti-Piwi, anti-FLAG M2-peroxidase, anti-H3K18Ac, anti-H3K27Ac, anti-H4K8Ac, anti-H4K12Ac)
- Detection of chemiluminescent signals using Chemi-Lumi One and Chemidoc MP Imaging system
- Image processing using Pixelmator or Fiji
- Quantification of immunoblot signals using Fiji
- Anti-FLAG M2-peroxidase [horseradish peroxidase (HRP)] (1:5000; Sigma-Aldrich, #A8592)
- Not explicitly mentioned
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