In vitro gene silencing assays were performed using primary mouse hepatocytes freshly isolated as previously reported (7 (link)). Free uptake and transfection assays were performed using protocols previously described (52 (link),53 (link)). Each siRNA concentration was analyzed in duplicate. For transfection assays, 5 μl siRNA at indicated concentrations were mixed with 4.9 μl of Opti-MEM (LifeTech, cat #31985–062) and 0.1 μl of Lipofectamine RNAiMax (Invitrogen, cat #13778150) per well of a 384-well plate. After incubation at room temperature for 15 min, 40 μl of William's E Medium (Life Tech, cat #A12176-01) containing ∼5×103 primary mouse hepatocytes were added to the wells. Cells were incubated for 24 h at 37°C in 5% CO2 prior to RNA purification. For free uptake experiments, 5 μl siRNA at indicated concentrations were mixed with 5 μl Opti-MEM (LifeTech, cat #31985-062) per well of a 384-well plate. After 15 min, 40 μl of William's E Medium (Life Tech, cat #A12176-01) or EMEM medium (ATCC) containing ∼5 × 103 cells were added to the siRNA mixture. Cells were incubated for 24 h at 37°C in 5% CO2 prior to RNA purification.
Silencing Assays in Mouse Hepatocytes
In vitro gene silencing assays were performed using primary mouse hepatocytes freshly isolated as previously reported (7 (link)). Free uptake and transfection assays were performed using protocols previously described (52 (link),53 (link)). Each siRNA concentration was analyzed in duplicate. For transfection assays, 5 μl siRNA at indicated concentrations were mixed with 4.9 μl of Opti-MEM (LifeTech, cat #31985–062) and 0.1 μl of Lipofectamine RNAiMax (Invitrogen, cat #13778150) per well of a 384-well plate. After incubation at room temperature for 15 min, 40 μl of William's E Medium (Life Tech, cat #A12176-01) containing ∼5×103 primary mouse hepatocytes were added to the wells. Cells were incubated for 24 h at 37°C in 5% CO2 prior to RNA purification. For free uptake experiments, 5 μl siRNA at indicated concentrations were mixed with 5 μl Opti-MEM (LifeTech, cat #31985-062) per well of a 384-well plate. After 15 min, 40 μl of William's E Medium (Life Tech, cat #A12176-01) or EMEM medium (ATCC) containing ∼5 × 103 cells were added to the siRNA mixture. Cells were incubated for 24 h at 37°C in 5% CO2 prior to RNA purification.
Corresponding Organization : Alnylam Pharmaceuticals (United States)
Other organizations : Vanderbilt University
Variable analysis
- SiRNA concentration
- Gene silencing efficiency
- Cell type (primary mouse hepatocytes)
- Incubation time (24 h)
- Temperature (37°C)
- CO2 concentration (5%)
- Positive control: Not specified
- Negative control: Not specified
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