For RNA and protein extraction from the luciferase reaction, 100 µL of TRI REAGENT-LS reagent were added to 100 µL of the luciferase reaction. Samples were stored at −80°C prior to processing according to the manufacturer's recommendations. RNA pellets were resuspended in 12 µL of FAE (formamide, 10 mM EDTA) (Shedlovskiy et al. 2017a (link)), and equal volumes of the dissolved RNA (5 µL) were analyzed by northern hybridizations using [32P]-labeled probes specific for 18S and 25S rRNAs. The radioactive signals corresponding to the rRNAs were measured as phosphorimaging units to obtain RLuc/18S rRNA and RLuc/25S rRNA ratios, where RLuc is the Renilla luciferase luminescence units, and 18S rRNA and 25S rRNA represent phosphorimaging units corresponding to the full length rRNAs in the same reaction.
Dual-Luciferase Assay for rRNA Quantification
For RNA and protein extraction from the luciferase reaction, 100 µL of TRI REAGENT-LS reagent were added to 100 µL of the luciferase reaction. Samples were stored at −80°C prior to processing according to the manufacturer's recommendations. RNA pellets were resuspended in 12 µL of FAE (formamide, 10 mM EDTA) (Shedlovskiy et al. 2017a (link)), and equal volumes of the dissolved RNA (5 µL) were analyzed by northern hybridizations using [32P]-labeled probes specific for 18S and 25S rRNAs. The radioactive signals corresponding to the rRNAs were measured as phosphorimaging units to obtain RLuc/18S rRNA and RLuc/25S rRNA ratios, where RLuc is the Renilla luciferase luminescence units, and 18S rRNA and 25S rRNA represent phosphorimaging units corresponding to the full length rRNAs in the same reaction.
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Corresponding Organization :
Other organizations : Rowan University
Variable analysis
- None explicitly mentioned
- Renilla luciferase luminescence units (RLuc)
- Ratios of RLuc/18S rRNA and RLuc/25S rRNA
- Volume of luciferase reaction (100 µL)
- Volume of TRI REAGENT-LS reagent (100 µL)
- Volume of dissolved RNA analyzed (5 µL)
- Positive control: Renilla Luciferase Assay System from Promega
- Positive control: Nano-Glo Dual-Luciferase Reporter Assay System
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