The gradient mobile phases were (A) 10 mM ammonium formate in 95:5 acetonitrile/water + 0.1% formic acid and (B) 10 mM ammonium formate in 50:50 acetonitrile/water + 0.1% formic acid for 30 min at a flow rate of 300 µL/min. Aliquots of serum extract (5 μL) were injected into a Thermo Fisher Scientific Accurore C18 Column (100 × 2.1 mm, 2.6 μm particle size), with a column temperature of 40 °C. MS data acquisition was performed using Thermo Fisher Scientific Xcalibur™ software v 2.2 SP1.48. Metabolites were determined through comparison of the ion features in the experimental samples to those of control samples based on retention time and molecular weight (m/z) using Thermo-Fisher Scientific Mass Frontier 7.0 software [30 (link),31 ].
Serum Metabolite Profiling by LC-MS
The gradient mobile phases were (A) 10 mM ammonium formate in 95:5 acetonitrile/water + 0.1% formic acid and (B) 10 mM ammonium formate in 50:50 acetonitrile/water + 0.1% formic acid for 30 min at a flow rate of 300 µL/min. Aliquots of serum extract (5 μL) were injected into a Thermo Fisher Scientific Accurore C18 Column (100 × 2.1 mm, 2.6 μm particle size), with a column temperature of 40 °C. MS data acquisition was performed using Thermo Fisher Scientific Xcalibur™ software v 2.2 SP1.48. Metabolites were determined through comparison of the ion features in the experimental samples to those of control samples based on retention time and molecular weight (m/z) using Thermo-Fisher Scientific Mass Frontier 7.0 software [30 (link),31 ].
Corresponding Organization : University of Arkansas for Medical Sciences
Protocol cited in 1 other protocol
Variable analysis
- Gradient mobile phases
- Aliquots of serum extract
- Metabolites
- Spray voltage
- Capillary temperature
- Heater temperature
- Sheath gas flow
- Auxiliary gas flow
- Mass scan range
- Flow rate
- Column temperature
- Control samples
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