The vitrified vesicle samples were imaged using a Talos Arctica 200 kV transmission electron microscope (ThermoFisher Scientific, Hillsboro, OR, USA) equipped with a Gatan K3 camera (Gatan, Inc., Pleasanton, CA, USA) The SerialEM software was used to collect images under low-dose conditions at 36,000 × magnification corresponding to a pixel size of 1.14 Å/pixel. For each image, 50 frames were recorded over 2.5 s exposure time at a dose rate of 35 electrons/pixel/s. The movie frames were aligned using MotionCorr2 (2) under Relion (Zivanov et al. 2018 (link)).
Cryo-EM Imaging of Extracellular Vesicles
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Corresponding Organization :
Other organizations : The University of Texas Health Science Center at Tyler, National Jewish Health, University of Colorado Denver, The University of Texas Southwestern Medical Center, Harvard University, University of Pittsburgh
Variable analysis
- Volume of EV solution (3-4 microliters)
- Characteristics of the vitrified vesicle samples observed using transmission electron microscopy
- Lacey carbon grids (300-mesh; Ted Pella, Inc., Redding, CA, USA)
- Negative glow-discharge duration (80 s at 30 mA)
- Sample blotting duration (3 s) using Vitrobot filter paper (Ted Pella, Inc, Redding, CA, USA)
- Plunge-freezing in liquid ethane cooled by liquid nitrogen using a Vitrobot plunge-freezer (ThermoFisher Scientific, Hillsboro, OR, USA)
- Transmission electron microscope (Talos Arctica 200 kV, ThermoFisher Scientific, Hillsboro, OR, USA)
- Camera (Gatan K3, Gatan, Inc., Pleasanton, CA, USA)
- Image acquisition software (SerialEM)
- Magnification (36,000×)
- Pixel size (1.14 Å/pixel)
- Exposure time (2.5 s)
- Dose rate (35 electrons/pixel/s)
- Image alignment software (MotionCorr2 under Relion)
- No positive or negative controls were explicitly mentioned in the provided information.
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