To determine the fluorescence intensity of a single Alexa Fluor 488 fluorophore on actin, we monitored filaments sparsely labeled with Alexa Fluor 488. Mother filaments were polymerized using 0.8 μM labeled G-actin (containing 10% Alexa Fluor 568–actin and 0.1% Alexa Fluor 488–actin). Then, by testing different laser powers and acquisition times, we determined a set of illumination conditions (100% laser power, 1000 ms acquisition time) that ensure the clear detection of a single Alexa Fluor 488 fluorophore in our setup.
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