DNA Fiber Analysis of Replication Dynamics
Partial Protocol Preview
This section provides a glimpse into the protocol.
The remaining content is hidden due to licensing restrictions, but the full text is available at the following link:
Access Free Full Text.
Corresponding Organization :
Other organizations : Harvard University, Massachusetts General Hospital, UPMC Hillman Cancer Center, The University of Texas Southwestern Medical Center, Howard Hughes Medical Institute
Variable analysis
- Treatment (with or without)
- Length of labeled DNA tracks
- Pulse-labeling duration
- Concentration of CldU (25 μM) and IdU (250 μM)
- Antibodies used for immunodetection (anti-CldU and anti-IdU)
- Secondary antibodies used (goat anti-mouse Alexa Fluor 594 and goat anti-rat Alexa Fluor 488)
- Incubation time and conditions for antibody staining (1 hour in a humidified chamber at room temperature)
- Imaging using Nikon Eclipse 80i fluorescence microscope with video confocal system
- Analysis using Fiji software and conversion factor (1 μm = 2.59 kb)
- Minimum of 100 individual fibers analyzed per experiment
- Mean of at least three independent experiments presented
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!