Acetylation Profiling of Histones
Partial Protocol Preview
This section provides a glimpse into the protocol.
The remaining content is hidden due to licensing restrictions, but the full text is available at the following link:
Access Free Full Text.
Corresponding Organization :
Other organizations : Johns Hopkins University, Johns Hopkins Medicine, Fox Chase Cancer Center
Protocol cited in 1 other protocol
Variable analysis
- P300 enzyme concentration (75 nM)
- CBP enzyme concentration (200 nM)
- Nonradioactive acetyl-CoA concentration (50 μM)
- Nucleosome concentration (1 μM)
- Time points (six)
- Acetylation of histones H3 and H4
- Acetylation reaction conditions (as described for the aforementioned acetyltransferase assays)
- Quenching with trichloroacetic acid
- Washing with acetone and drying
- Blocking of free lysines with propionic anhydride and ammonium hydroxide treatment
- Trypsin digestion of modified proteins
- Separation of peptides on a Waters Acquity UPLC system with a BEH C18 column
- Identification of acetylated and propionylated peptides on a Thermo TSQ Quantum Access triple-quadrupole mass spectrometer
- Selected reaction monitoring for H3 and H4 acetylated and propionylated peptides
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!