Plasmids were constructed as described previously
16 (link) using oligonucleotides listed in Supplementary Table
1. Bacterial strains were cultured in Luria-Bertani broth (LB) containing 50 µg ml
−1 Carbenicillin (Roth, 6344.3).
For generation of a plasmid encoding triple HA-tagged SseF, p2643 (
sscB sseF::HA) was used and
sseF::HA on p2643 was replaced by
sseF::3HA using Gibson assembly GA. Primers for generation of vector fragment, check primers and sequence of synthetic
sseF::3xHA (gBlocks, IDT) are listed in Supplementary Table
1.
Mutagenesis was performed for plasmids p4286, p4295, p4300, and p4305 encoding
sseJ::HaloTag,
pipB2::HaloTag,
sopD2::HaloTag or
sifA::HaloTag, respectively, using primers listed in Supplementary Table
1. Deletion of codons 331-336 in
sifA removes the previously described prenylation site
24 (link) and was expected to reduce membrane interaction. Mutations Y281D Y284D K288D (
sopD2), N309D L312D V316D (
sseJ), and Y54D L57D M61D (
pipB2) affect coiled-coil (CC) domains that were reported to contribute to membrane interactions of translocated T3SS effector proteins
25 (link). Site-directed mutagenesis was performed using the
Q5 SDM kit (NEB, E0554S), and resulting plasmids were confirmed by sequencing (SeqLab, Göttingen).