Targeted Gene Enrichment for Non-syndromic SNHL
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Corresponding Organization : Shinshu University
Other organizations : Yokohama City University, University of Iowa Hospitals and Clinics, Mita Hospital
Variable analysis
- None explicitly mentioned
- Sequencing of all exons of all genes implicated in non-syndromic SNHL, including non-syndromic SNHL mimics
- Germ line DNA (gDNA) samples
- Random fragmentation of gDNA to an average size of 250 bp
- Fragment end repair, A-tailing, and sequencing adapter ligation
- Solid phase reverse immobilization purifications between each enzymatic reaction
- Hybridization and capture with RNA baits
- Minimal amplification: 8 cycles for pre-hybridization PCR and 14 cycles for post-hybridization PCR
- Barcoding and multiplexing of samples before sequencing on Illumina MiSeq or HiSeq platforms
- None explicitly mentioned
- None explicitly mentioned
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