We selected 14 white lupin accessions to evaluate a broader range of the genetic diversity and determine population structure and linkage disequilibrium. More information about these accessions can be found in Supplementary Note 4. Young leaves of 30 plants were used to extract genomic DNA of each accession using the QIAGEN Genomic-tip 100/G kit following the supplier’s recommendations. The accessions were sequenced using Illumina technology using paired-end 2 × 150 bp short-reads. It was generated a total of 310.95 Gb of data with average sequencing depth of 45.99× (Supplementary Table 8).
Hufnagel B., Marques A., Soriano A., Marquès L., Divol F., Doumas P., Sallet E., Mancinotti D., Carrere S., Marande W., Arribat S., Keller J., Huneau C., Blein T., Aimé D., Laguerre M., Taylor J., Schubert V., Nelson M., Geu-Flores F., Crespi M., Gallardo K., Delaux P.M., Salse J., Bergès H., Guyot R., Gouzy J, & Péret B. (2020). High-quality genome sequence of white lupin provides insight into soil exploration and seed quality. Nature Communications, 11, 492.
Other organizations :
Institut des Sciences des Plantes de Montpellier, Laboratoire des Interactions Plantes Micro-Organismes, University of Copenhagen, Laboratoire de Recherche en Sciences Végétales, Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement, Génétique, Diversité, Écophysiologie des Céréales, Institut des Sciences des Plantes de Paris Saclay, Agroécologie, Institut Agro Dijon, Royal Botanic Gardens, Kew, Leibniz Institute of Plant Genetics and Crop Plant Research, University of Western Australia, Institut de Recherche pour le Développement
Young leaves of 30 plants used to extract genomic DNA for each accession
QIAGEN Genomic-tip 100/G kit used to extract genomic DNA following supplier's recommendations
Illumina technology used to sequence the accessions using paired-end 2 × 150 bp short-reads
controls
No positive or negative controls were explicitly mentioned in the provided information.
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