Identifying Malignant Cells via CNV
Corresponding Organization : Wenzhou Medical University
Other organizations : Shanghai Pulmonary Hospital, Tongji University, Tongji Hospital
Variable analysis
- Use of the CopyKAT algorithm (version 0.1.0) to estimate the copy number variations (CNVs)
- CNV score of the cell, defined as the sum of calculated CNV for each gene per cell
- Stromal cells (fibroblasts and endothelia) used as normal reference
- Default parameters used for the CopyKAT algorithm
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