Two gene annotations of the Musa acuminata draft genome sequence were available for the initial assembly. The first corresponded to the annotation published by [27 (link)], in addition to approximately 1000 genes curated by human expertise before 08 December 2014 (http://banana-genome.cirad.fr/). The second one was the NCBI RefSeq genome annotation released the 7 October 2014 (ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Musa_acuminata/) and generated with the NCBI Eukaryotic Genome Annotation Pipeline.
Martin G., Baurens F.C., Droc G., Rouard M., Cenci A., Kilian A., Hastie A., Doležel J., Aury J.M., Alberti A., Carreel F, & D’Hont A. (2016). Improvement of the banana “Musa acuminata” reference sequence using NGS data and semi-automated bioinformatics methods. BMC Genomics, 17, 243.
Other organizations :
Centre de Coopération Internationale en Recherche Agronomique pour le Développement, Agropolis International, BioNano Genomics (United States), Czech Academy of Sciences, Institute of Experimental Botany, Commissariat à l'Énergie Atomique et aux Énergies Alternatives, Genoscope
Two gene annotations of the Musa acuminata draft genome sequence
dependent variables
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control variables
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controls
The first gene annotation corresponded to the annotation published by [27 (link)], in addition to approximately 1000 genes curated by human expertise before 08 December 2014 (http://banana-genome.cirad.fr/)
The second gene annotation was the NCBI RefSeq genome annotation released the 7 October 2014 (ftp://ftp.ncbi.nlm.nih.gov/genomes/refseq/plant/Musa_acuminata/) and generated with the NCBI Eukaryotic Genome Annotation Pipeline.
Annotations
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