Tissue microarrays (TMAs) of formalin-fixed paraffin-embedded tissue of patients diagnosed at early-stage HGSOC were designed and prepared at the Institute of Pathology, Charité Medical University Berlin. For MALDI-imaging, a 6 µm section was prepared from a paraffin block on a microtome and transferred onto Indium-Tin-Oxide slides (Bruker Daltonik, Bremen, Germany) through decreasing concentrations of ethanol (modified by Caprioli et al.) [37 (link)] and antigen retrieval was performed (modified by Gustafsson et al.) [38 (link)]. Trypsin and matrix solutions (α-Cyano-4-hydroxycinnamic acid) were deposited by an automated spraying device (HTX Sprayer). An amount of 550 µL trypsin solution (20µg, 20mM ammonium bicarbonate) was applied onto the section. After tissue incubation (2 h at 50 °C; moist chamber), matrix solution (1 mL 7g/L α-cyano-4-hydroxycinnamic acid in 50% acetonitrile and 1% trifluoroacetic acid) was applied using a HTX Sprayer (75 °C, estimate cycle 1.80).
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