Comprehensive RNAi Screening Protocol
Corresponding Organization :
Other organizations : Hubrecht Institute for Developmental Biology and Stem Cell Research, Wellcome Trust, Wellcome/Cancer Research UK Gurdon Institute
Protocol cited in 18 other protocols
Variable analysis
- Performing RNAi as described in Fraser et al. 2000 and Kamath et al. 2000 with minor adaptations when the rrf-3 strain was used
- Leaving L3- to L4-staged hermaphrodites on the first plate for 48 h at 15°C instead of 72 h
- Plating single adults onto other plates seeded with the same bacteria
- Not removing the mothers from the second plates
- Emb (embryonic lethal)
- Ste (sterile)
- Stp (sterile progeny)
- Brd (low broodsize)
- Gro (slow postembryonic growth)
- Lva (larval arrest)
- Lvl (larval lethality)
- Adl (adult lethal)
- Bli (blistering of cuticle)
- Bmd (body morphological defects)
- Clr (clear)
- Dpy (dumpy)
- Egl (egg-laying defective)
- Lon (long)
- Mlt (molt defects)
- Muv (multivulva)
- Prz (paralyzed)
- Pvl (protruding vulva)
- Rol (roller)
- Rup (ruptured)
- Sck (sick)
- Unc (uncoordinated) Thin and Pale
- Emb was defined as greater than 10% dead embryos for N2 and greater than 30% dead embryos for rrf-3
- Ste required a brood size of fewer than ten among fed N2 worms and fewer than five among rrf-3
- Each postembryonic phenotype was required to be present among at least 10% of the analysed worms
Annotations
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