Nup188, Nup205, Nup93, Nup155, Nup85 and Nup62 cDNAs were purchased from the human ORFeome collection, subcloned into a Gateway destination vector with an N-terminal His6-HA-StrepII-tag, and stably transfected into the cell line 293 Flp-In T-REx (Life Technologies). Cells were treated for 8 days with 1 μg/ml of tetracycline to induce the expression of the fusion protein, which was subsequently affinity-purified.
Inducible RNAi and Affinity Purification of Nuclear Pore Proteins
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Corresponding Organization : McGill University
Other organizations : European Molecular Biology Laboratory, Stevens Institute of Technology, Friedrich Miescher Laboratory, Max Planck Society
Variable analysis
- Inducible plasmid expressing EmGFP and a microRNA against the ORF of the Nup358 mRNA
- Tetracycline treatment duration (4 days for HeLa Flp-In T-REx cells, 8 days for 293 Flp-In T-REx cells)
- Nuclear envelope isolation and plunge freezing
- Cell line (HeLa Flp-In T-REx, 293 Flp-In T-REx)
- Mycoplasma contamination testing
- No positive controls specified
- No negative controls specified
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