Epithelial cells were extracted from pregnant mammary glands for RUNX2 western. Runx2−/− mouse embryonic fibroblasts (Rx2KO MEFs) (Kilbey et al., 2007 (link)) were used as negative control. MDA-MB-231 was purchased from American Type Culture Collection. MDA-MB-231 cells were transfected with RUNX2 shRNA and scrambled control (HuSHTM, Origene) through electroporation using Nucleofector Kit V program X-013 (Amaxa, Lonza). For immunohistochemistry, cells were fixed with 2% paraformaldehyde for 15 minutes. After centrifugation, pellets were resuspended in 200 μl of 3% UltraPure low-melting agarose (Invitrogen) and left for 20 minutes at RT to solidify. The agarose plug in 70% ethanol was embedded in paraffin blocks and stained as above.
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