Clinical, laboratory, and chest imaging data obtained during COVID-19, other risk factors for severe COVID-19 (Rodrigues et al., 2020 (link); Zhang et al., 2020a (link), 2022a (link); Bennett et al., 2021 (link); Bourgeois et al., 2021 (link); Kooistra et al., 2021 (link); Navaratnam et al., 2021 (link); O’Driscoll et al., 2021 (link); Westblade et al., 2021 (link); Martin et al., 2022a (link); Schober et al., 2022 (link); Woodruff et al., 2022 (link)), and family history were collected for each patient in the survey. Concomitant infections were also recorded, when supported by clinical suspicion, positive cultures, and/or chest x-ray images. Adults with a body mass index (BMI) over 25 were considered to be overweight, and those with a BMI over 30 were considered to be obese. Children aged between 5 and 19 yr were considered to be obese if their BMI-for-age-and-sex was more than 2 SD above the WHO Growth Reference median. Children under 5 yr of age were considered to be obese if their weight-for-height was more than 3 SD above the WHO Child Growth Standard median (WHO, 2021 ). COVID-19 severity was assessed according to the Human Genetic Effort clinical score (Asano et al., 2021 (link)). SARS-CoV-2 infection was classified as mild/non-confirmed pneumonia (for patients who were asymptomatic, presented upper respiratory tract disease with no signs of pneumonia on x ray or with respiratory symptoms not suggestive of a lower respiratory tract infection and therefore not requiring x ray), moderate (non-hypoxemic pneumonia, not requiring oxygen therapy), severe (hypoxemic pneumonia requiring therapy with oxygen <6 liters O2/min, without meeting the criteria for critical pneumonia) or critical (hypoxemic pneumonia requiring high-flow oxygen >6 liters O2/min, ventilatory support with or without intubation, or ECMO [extracorporeal membrane oxygenation]). Laboratory values were recorded when available. Normal ranges of laboratory values were reported according to age and are expressed in standard units (Hollowell et al., 2005 (link); Mayo Clinic, 2022 ).
García-García A., Pérez de Diego R., Flores C., Rinchai D., Solé-Violán J., Deyà-Martínez À., García-Solis B., Lorenzo-Salazar J.M., Hernández-Brito E., Lanz A.L., Moens L., Bucciol G., Almuqamam M., Domachowske J.B., Colino E., Santos-Perez J.L., Marco F.M., Pignata C., Bousfiha A., Turvey S.E., Bauer S., Haerynck F., Ocejo-Vinyals J.G., Lendinez F., Prader S., Naumann-Bartsch N., Pachlopnik Schmid J., Biggs C.M., Hildebrand K., Dreesman A., Cárdenes M.Á., Ailal F., Benhsaien I., Giardino G., Molina-Fuentes A., Fortuny C., Madhavarapu S., Conway D.H., Prando C., Schidlowski L., Martínez de Saavedra Álvarez M.T., Alfaro R., Rodríguez de Castro F., Meyts I., Hauck F., Puel A., Bastard P., Boisson B., Jouanguy E., Abel L., Cobat A., Zhang Q., Casanova J.L., Alsina L, & Rodríguez-Gallego C. (2023). Humans with inherited MyD88 and IRAK-4 deficiencies are predisposed to hypoxemic COVID-19 pneumonia. The Journal of Experimental Medicine, 220(5), e20220170.
Other organizations :
Hospital Sant Joan de Déu Barcelona, Hospital La Paz Institute for Health Research, Instituto Tecnológico y de Energías Renovables, Universidad Fernando Pessoa Canarias, Instituto de Salud Carlos III, Rockefeller University, Hospital Universitario de Gran Canaria Doctor Negrín, Ludwig-Maximilians-Universität München, KU Leuven, Universitair Ziekenhuis Leuven, St. Christopher's Hospital for Children, Drexel University, SUNY Upstate Medical University, Hospital Universitario Insular de Gran Canaria, Hospital Universitario Virgen de las Nieves, Hospital General Universitario de Alicante Doctor Balmis, Federico II University Hospital, University of Hassan II Casablanca, British Columbia Children's Hospital, University of British Columbia, Ghent University Hospital, Ghent University, Marqués de Valdecilla University Hospital, Instituto de Investigación Marqués de Valdecilla, Hospital Materno-Infantil, University Children's Hospital Zurich, University of Zurich, Centre Hospitalier Universitaire de Saint-Pierre, Departament de Salut, Universitat de Barcelona, Universidad de Las Palmas de Gran Canaria, Université Paris Cité, Institut des Maladies Génétiques Imagine, Howard Hughes Medical Institute, Inserm, Assistance Publique – Hôpitaux de Paris
Clinical, laboratory, and chest imaging data obtained during COVID-19
Other risk factors for severe COVID-19 (Rodrigues et al., 2020; Zhang et al., 2020a, 2022a; Bennett et al., 2021; Bourgeois et al., 2021; Kooistra et al., 2021; Navaratnam et al., 2021; O'Driscoll et al., 2021; Westblade et al., 2021; Martin et al., 2022a; Schober et al., 2022; Woodruff et al., 2022)
Family history
dependent variables
COVID-19 severity, assessed according to the Human Genetic Effort clinical score (Asano et al., 2021)
control variables
Concomitant infections, when supported by clinical suspicion, positive cultures, and/or chest x-ray images
Body mass index (BMI) over 25 for adults considered overweight, and BMI over 30 considered obese
BMI-for-age-and-sex more than 2 SD above the WHO Growth Reference median for children aged 5-19 yr considered obese
Weight-for-height more than 3 SD above the WHO Child Growth Standard median for children under 5 yr considered obese
Annotations
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