Rosa26 targeting by a knock-in strategy was performed based on the pROSA26–1 plasmid59 (link). Murine Snail cDNA (Snai1 cDNA; Library: IRAV MGC Mouse verified full length amplified cDNA; Clone: IRAVp968A0443D6, German Science Centre for Genome Research) was cloned into the targeting vector 3´ of a loxP-flanked transcriptional and translational stop element (loxP-stop-loxP, LSL) with a neomycin resistance cassette (Supplementary Fig. S1a). The targeting vector was linearized, electroporated into W4/129S6 embryonic stem cells, selection with 250 µg/ml geneticin imposed, and correctly targeted cell clones identified by PCR59 (link). Gene targeting was verified by Southern blot with an external 32P-labeled 5´ probe and EcoRV digested genomic DNA (Supplementary Fig. S1b). The Southern blot images were processed with an Amersham automatic Hyperprocessor (Amersham Biosciences). Two verified cell clones were injected into C57BL/6 J blastocysts (Polygene). Germ-line transmission was achieved in 2/2 clones harbouring the targeted allele. The mice were genotyped using a 3-primer PCR strategy (ref. 59 (link), Table 1 and Supplementary Fig. S1c).
Recombination PCR primers for LSL-Rosa26Snail allele
Paul M.C., Schneeweis C., Falcomatà C., Shan C., Rossmeisl D., Koutsouli S., Klement C., Zukowska M., Widholz S.A., Jesinghaus M., Heuermann K.K., Engleitner T., Seidler B., Sleiman K., Steiger K., Tschurtschenthaler M., Walter B., Weidemann S.A., Pietsch R., Schnieke A., Schmid R.M., Robles M.S., Andrieux G., Boerries M., Rad R., Schneider G, & Saur D. (2023). Non-canonical functions of SNAIL drive context-specific cancer progression. Nature Communications, 14, 1201.
Other organizations :
German Cancer Research Center, Heidelberg University, Ludwig-Maximilians-Universität München, Technical University of Munich, Klinikum rechts der Isar, University of Freiburg
Cre-mediated recombination of the LSL-Rosa26^Snail allele
dependent variables
Expression of the Snail gene
control variables
W4/129S6 embryonic stem cells
C57BL/6J blastocysts
controls
Positive control: Southern blot analysis to verify gene targeting
Negative control: Not explicitly mentioned
Annotations
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