iPSC colonies were picked manually (d15) and plated on Matrigel-coated wells in E8 medium. Media were changed every other day and cells were expanded up to passage 10. Thereafter, we used PCR targeting EBNA1 (Fw: 5’-ATCGTCAAAGCTGCACACAG −3′; Rv: 5’-CCCAGGAGTCCCAGTAGTCA −3′, Sigma) and OriP (Fw: 5’-TTCCACGAGGGTAGTGAACC -3′; Rv: 5’-TCGGGGGTGTTAGAGACAAC -3′, Sigma) to confirmed that the reprogramming plasmids had not integrated into the genome [24 (link)].
Generating iPSCs from Human Fibroblasts
iPSC colonies were picked manually (d15) and plated on Matrigel-coated wells in E8 medium. Media were changed every other day and cells were expanded up to passage 10. Thereafter, we used PCR targeting EBNA1 (Fw: 5’-ATCGTCAAAGCTGCACACAG −3′; Rv: 5’-CCCAGGAGTCCCAGTAGTCA −3′, Sigma) and OriP (Fw: 5’-TTCCACGAGGGTAGTGAACC -3′; Rv: 5’-TCGGGGGTGTTAGAGACAAC -3′, Sigma) to confirmed that the reprogramming plasmids had not integrated into the genome [24 (link)].
Corresponding Organization : Helsinki University Hospital
Other organizations : Institute for Molecular Medicine Finland, Finland University
Variable analysis
- Transfection of human fibroblasts with CRISPR/Cas9 activators
- Reprogramming of fibroblasts into iPSC colonies
- Absence of reprogramming plasmid integration in the genome
- Fibroblast cell culture conditions (DMEM, 10% FBS, Matrigel-coated plates)
- Passage number of iPSCs (up to passage 10)
- Not explicitly mentioned
- Not explicitly mentioned
Annotations
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