Transcriptome Analysis of Inflammatory Mediators
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Corresponding Organization :
Other organizations : Temple University
Protocol cited in 12 other protocols
Variable analysis
- Experimental data mining strategy
- Expression profiles of mRNA transcripts of TLRs, NLRs, inflammasome components, inflammatory caspases, proinflammatory cytokines IL-1β and IL-18 in vasculature-related tissues
- Transcript per million of the house-keeping gene β-actin in any given tissue
- Three randomly selected house-keeping genes normalized by β-actin in given tissues
- Positive control: The expression variation of a given gene in various tissues was larger than the upper limit of the confidential intervals (the mean plus 2 times the standard deviations) of the house-keeping genes
- Negative control: Any given gene transcript lower than one per million was technically presented as no expression
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