Fungal DNA Extraction and Sequencing Protocol
Corresponding Organization : University of British Columbia
Other organizations : Mae Fah Luang University, Chiang Mai University, Kunming Institute of Botany, Chinese Academy of Sciences, World Agroforestry Centre, University of Mauritius
Protocol cited in 1 other protocol
Variable analysis
- Growth time (20–30 days)
- Growth temperature (25°C)
- Total genomic DNA extracted from fresh mycelia
- Successful PCR amplification of LSU, SSU, ITS and RPB2 gene regions
- Fungus species/strain
- Growth medium (PDA)
- DNA extraction kit (Biospin Fungus Genomic DNA Extraction Kit)
- Primer pairs used for PCR amplification (LR0R/LR5, NS1/NS4, ITS5/ITS4, RPB2-5F/RPB2-7cR)
- PCR reaction volume (25 μL)
- PCR reagents (ddH2O, 2 × PCR Master Mix, DNA template, primers)
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