Complete amplification of the viral genome was performed using a PCR reaction with Phusion High Fidelity (Thermo Fisher) enzyme and the designed primers ZIKV-Forward (5′ CG ATT AAG TTG GGT AAC GCC AGG GT 3′) and ZIKV-Reverse (5′ T AGA CCC ATG GAT TTC CCC ACA CC 3′). The PCR product containing SP6 promoter followed by complete viral cDNA was purified with the DNA clean and concentration kit (Zymo Research). In vitro transcription was performed using the RiboMAX™ Large-scale RNA Production Systems kit (Promega), as instructed by the manufacturers.
Zika Virus Nanoluc Plasmid Construction
Complete amplification of the viral genome was performed using a PCR reaction with Phusion High Fidelity (Thermo Fisher) enzyme and the designed primers ZIKV-Forward (5′ CG ATT AAG TTG GGT AAC GCC AGG GT 3′) and ZIKV-Reverse (5′ T AGA CCC ATG GAT TTC CCC ACA CC 3′). The PCR product containing SP6 promoter followed by complete viral cDNA was purified with the DNA clean and concentration kit (Zymo Research). In vitro transcription was performed using the RiboMAX™ Large-scale RNA Production Systems kit (Promega), as instructed by the manufacturers.
Corresponding Organization :
Other organizations : Universidade Federal de Uberlândia, Universidade Estadual Paulista (Unesp), Universidade Federal de Goiás, Universidade de São Paulo, Rutgers, The State University of New Jersey, Collaborations Pharmaceuticals (United States), University of Tartu, Institute of Structural and Molecular Biology, University of Leeds
Protocol cited in 7 other protocols
Variable analysis
- Amplification of the viral genome using PCR with Phusion High Fidelity enzyme and designed primers ZIKV-Forward and ZIKV-Reverse
- In vitro transcription using the RiboMAX™ Large-scale RNA Production Systems kit
- Amplified viral cDNA containing SP6 promoter
- Maintenance and propagation of the plasmid containing the pCCI-SP6-ZIKV-Nanoluc in E. coli Turbo strain
- Positive control: Not explicitly mentioned
- Negative control: Not explicitly mentioned
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!