Subcellular Localization of SNARE Proteins

To predict subcellular localization and mitochondrial targeting signals between SNARE proteins we analyzed protein sequences retrieved from WormBase using DeepLoc 2.0(DTU Health Tech, Lyngby, Denmark) (https://services.healthtech.dtu.dk/service.php?DeepLoc-2.0) (accessed on 16 July 2022), MitoProt II (Institute of Human Genetics, Munich, Germany) (https://ihg.helmholtz-muenchen.de/ihg/mitoprot.html) (accessed on 29 July 2022) and iMLP Technical University of Kaiserslautern, Kaiserslautern, Germany) (http://imlp.bio.uni-kl.de/) (accessed on 26 August 2022) tools [35 (link),36 (link),37 (link)].

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Gkikas I., Daskalaki I., Kounakis K., Tavernarakis N, & Lionaki E. (2023). MitoSNARE Assembly and Disassembly Factors Regulate Basal Autophagy and Aging in C. elegans. International Journal of Molecular Sciences, 24(4), 4230.

Publication 2023

Mitochondrial Mitochondrial proteins Protein sequences Snare proteins

Corresponding Organization : University of Crete

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Variable analysis

independent variables

Protein sequences retrieved from WormBase

dependent variables

Subcellular localization
Mitochondrial targeting signals

control variables

Not explicitly mentioned

controls

No positive or negative controls specified

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