Mutation Analysis of KLF2 and NOTCH2
Variable analysis
- Cycling conditions for the first round of PCR: 10 s at 98 °C (30 s for the first cycle), followed by 20 cycles of 30 s at 58 °C and 1.5 min at 72 °C (5 min for the last cycle)
- Cycling conditions for the second round of PCR: 30 cycles
- Presence of somatic mutations in the KLF2 (exon 1–3) and in the NOTCH2 (exon 34) genes
- Use of Platinum SuperFi DNA polymerase (Thermo Fisher Scientific) for nested PCR
- Amplification of exon 1–2 and exon 3 of KLF2 and exon 34 of NOTCH2
- Agarose gel electrophoresis and ethidium bromide staining of amplification products
- Sanger sequencing for investigation of somatic mutations in KLF2 (exon 1–3) and NOTCH2 (exon 34)
- Positive control: Not explicitly mentioned
- Negative control: Not explicitly mentioned
Annotations
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