Microscopic observation of giant cells was performed as described by Ji et al. [23 (link)]. The experiment was repeated twice, with 10 galls in each replicate. Each 2-week-old plant was inoculated with 100 J2 s, and root galls were collected at 7 dpi. After fixation in 1× PIPES buffer overnight, root galls were dehydrated in several ethanol dilutions and embedded with Technovit 7100 for 2 weeks. The embedded gall tissues were sectioned into 10-μm slices with a CryoStar NX50 Cryostat (Thermo Fisher Scientific, MA, USA) and stained with 0.05% toluidine blue for 5 min. Microscopic observations were performed using a IX83 research inverted microscope (Olympus Optical Company, Tokyo, Japan) at 40 magnification.
Callose deposition was examined according to Millet et al. [33 (link)]. Rice plants were maintained in 0.04% Si or in control conditions for 2 weeks and inoculated with 100 J2 s each. Ten root galls from each treatment were fixed in an ethanol acetic acid solution overnight and then dehydrated in ethanol dilutions. The root galls were stained with 0.01% aniline blue solution. Callose deposition was examined under UV light using an Eclipse Ti epifluorescence microscope (Nikon Tec. Corporation, Tokyo, Japan) and quantified using ImageJ software.
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