Improved BLAST Filters for Rfam Annotation
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Corresponding Organization :
Other organizations : Wellcome Sanger Institute
Protocol cited in 129 other protocols
Variable analysis
- Sequence-based filters to prune the search space
- Replacement of BLAST-based sequence filters with WU-BLAST search
- Application of sequence mask to alignment columns with low frequency or insert relative to majority
- Search sensitivity
- Number of spurious hits
- Sensitivity of BLAST filters
- Not explicitly mentioned
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