Fungal Genomic DNA Extraction and Multi-gene Sequencing
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Corresponding Organization :
Other organizations : University of Chinese Academy of Sciences, Chinese Academy of Sciences, Westerdijk Fungal Biodiversity Institute, Wageningen University & Research, Ningbo Entry-Exit Inspection And Quarantine Bureau
Protocol cited in 2 other protocols
Variable analysis
- Genomic DNA extraction method (modified CTAB protocol)
- Primer pairs used for PCR amplification
- PCR amplification procedures
- DNA sequences of the following gene regions: 5.8S nuclear ribosomal RNA gene with the two flanking internal transcribed spacer (ITS) regions, intergenic spacer region of the rDNA (IGS), partial translation elongation factor (tef1), partial calmodulin (cam), partial RNA polymerase largest subunit (rpb1), partial RNA polymerase second largest subunit (rpb2), and partial β-tubulin (tub2)
- Fungal mycelia grown on PDA
- 2 × Taq PCR Master Mix composition
- Primer concentrations (10 μM)
- Genomic DNA concentration (undiluted)
- Not explicitly mentioned
- Not explicitly mentioned
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