SH-SY5Y Cell RNA Extraction and qPCR
Corresponding Organization : University of Perugia
Variable analysis
- None explicitly mentioned
- Expression levels of the following genes:
- Brain-derived neurotrophic factor (BDNF)
- Glial cell-derived neurotrophic factor (GDNF)
- Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
- SH-SY5Y cells used for total RNA extraction
- RNAqueous®-4PCR kit (Ambion Inc.) used for RNA extraction
- Integrity of RNA evaluated by denaturing electrophoresis in TAE 1.2% agarose gel
- 1 μg of total RNA used for cDNA synthesis using High-Capacity cDNA Reverse Transcription kit (Applied Biosystems)
- Conditions for cDNA synthesis: 50 °C for 2 min, 95 °C for 10 min, 95 °C for 15 s, and 60 °C for 1 min for 40 cycles
- RT-qPCR performed using Master Mix TaqMan®Gene Expression and the 7.500 RT-PCR instrument (Applied Biosystems)
- No positive or negative controls explicitly mentioned
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