Adult double transgenic (mpeg1:mCherry/mpx:eGFPi114) expressing mCherry under the macrophage-specific mpeg1 promotor and GFP under the neutrophil-specific mpx promotor fish were housed and fed as previously described [49 (link)]. Embryos were obtained by natural spawning. Fish were fed as follows: weeks 1 and 2 with rotifers (× 4/day from 5 days post fertilization -dpf-), week 3 with rotifers and Artemia Nauplii 230.000 npg (Nauplii per gram) (Ocean Nutrition Europe, Essen, Belgium) (× 2/day), week 4 with Artemia (× 2/day) and until 40 dpf Artemia and Tetramin Flakes (Tetra, Melle, Germany) (× 2/day). When fish reached the juvenile stage, at 40 dpf [76 (link)], fish were randomly distributed into 6 tanks, 2 per each diet: one was sampled after 1 week and the other tank after 3 weeks of the feeding experiment per each diet. The feeding experiment was performed blind and fish were fed until slightly before satiation twice a day. Each tank received one of the following: a control diet, a saponin-supplemented diet or a butyrate-supplemented diet. Full diet composition is listed in Table 1.
Formulation of experimental diets analysed once the feed intervention was performed to check which compositions corresponded to the blinded diets
A: Control diet (%)
B: Butyrate diet (%)
C: Saponin diet (%)
Wheat
7.00
6.99
6.67
Wheat gluten
16.00
16.00
16.00
Sunflower meal
1.68
1.68
1.68
Soy protein concentrate
15.16
15.16
15.16
Fish meal
52.00
52.00
52.00
Fish oil
4.40
4.40
4.40
Rapeseed oil
2.00
2.00
2.00
Vitamin mix
0.35
0.35
0.35
Mineral mix
1.92
1.92
1.92
Butyrate
0.00
0.01
0.00
Saponin
0.00
0.00
0.33
[VOLUME]
100.0
100.0
100.0
Dry matter
92.2
92.0
92.0
Crude protein
56.0
57.4
57.4
Crude fat
13.5
13.8
13.8
Ash
8.9
8.9
8.9
The three diets are similar in composition (dry-matter, protein, fat and ash). 95% ultrapure soy saponin was kindly provided by Trond Kortner NMBU Oslo Norway, origin: Organic Technologies, Coshocton, OH, [40 (link)]
López Nadal A., Boekhorst J., Lute C., van den Berg F., Schorn M.A., Bergen Eriksen T., Peggs D., McGurk C., Sipkema D., Kleerebezem M., Wiegertjes G.F, & Brugman S. (2023). Omics and imaging combinatorial approach reveals butyrate-induced inflammatory effects in the zebrafish gut. Animal Microbiome, 5, 15.
Diet type (control, butyrate-supplemented, saponin-supplemented)
dependent variables
Not explicitly mentioned
control variables
Fish housing and feeding prior to the feeding experiment (as described in reference 49)
Fish age (juvenile stage, 40 dpf)
Fish distribution (randomly distributed into 6 tanks, 2 per each diet)
controls
Positive control: Not specified
Negative control: Control diet (no butyrate or saponin supplementation)
Annotations
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