For in vitro phosphorylation-mediated self-PARylation assays, 4 μg HIS-FonPARP1 underwent prior in vitro phosphorylation by HIS-FonKin4-ST, as described above. Then, 50 μL PARylation buffer was then added, followed by incubation at 26°C for 30 min. The reaction was stopped by adding 4× SDS loading buffer, and the proteins were then separated on 8% and 12.5% SDS-PAGE. Phosphorylated proteins were detected by anti-phosphor Ser/Thr antibody. PARylated proteins detected through immunoblotting with streptavidin-HRP (Cat. #21126, Thermo Fisher Scientific, Waltham, MA, USA) for Biotin NAD+ or anti-HIS antibody (Cat. #A00186, GenScript).
In vitro PARylation and Phosphorylation Assays
For in vitro phosphorylation-mediated self-PARylation assays, 4 μg HIS-FonPARP1 underwent prior in vitro phosphorylation by HIS-FonKin4-ST, as described above. Then, 50 μL PARylation buffer was then added, followed by incubation at 26°C for 30 min. The reaction was stopped by adding 4× SDS loading buffer, and the proteins were then separated on 8% and 12.5% SDS-PAGE. Phosphorylated proteins were detected by anti-phosphor Ser/Thr antibody. PARylated proteins detected through immunoblotting with streptavidin-HRP (Cat. #21126, Thermo Fisher Scientific, Waltham, MA, USA) for Biotin NAD+ or anti-HIS antibody (Cat. #A00186, GenScript).
Variable analysis
- Concentration of NAD+
- Presence/absence of activated DNA
- Concentration of GST-FonKin4
- Presence/absence of prior phosphorylation of HIS-FonPARP1 by HIS-FonKin4-ST
- PARylation of HIS-FonPARP1 detected by anti-poly-ADPR antibody
- Phosphorylation of HIS-FonPARP1 detected by anti-phosphor Ser/Thr antibody
- PARylation of HIS-FonPARP1 detected by streptavidin-HRP for Biotin NAD+
- Reaction buffer composition (50 mM Tris–HCl, 50 mM NaCl, 10 mM MgCl2, pH 8.0)
- Incubation temperature (26°C)
- Incubation time (3 h for PARylation assay, 30 min for phosphorylation-mediated self-PARylation assay)
- HIS-FonPARP1 as the positive control for PARylation detection
- HIS-FonKin4-ST as the positive control for phosphorylation of HIS-FonPARP1
- No information provided about negative controls
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!