Protocol detail

Comprehensive Genomic Profiling for Cancer

Find Similar Protocols

CGP testing was performed using hybrid capture-based targeted DNA sequencing with FoundationOne CDx (Foundation Medicine), the OncoGuide NCC Oncopanel System (Sysmex Corporation), in-house NGS testing, or in blood-derived cell-free DNA with FoundationOne Liquid CDx (Foundation Medicine) or Guardant360 CDx (Guardant Health).^{4 (link),25 (link),26 (link),27 (link)} All patients were referred to the NCCH following discussion by regional molecular tumor boards (MTB) comprising medical oncologists, pediatric oncologists, pathologists, bioinformaticians, genome researchers, and genetic counselors.^{3 (link),28 (link)} In addition to reports from the inspection companies, the MTBs used reports containing clinical annotation and information regarding genotype-matched clinical trials from the Center for Cancer Genomics and Advanced Therapeutics national database.^{29 (link),30 (link)}

Free full text: Click here

Uehara Y., Koyama T., Katsuya Y., Sato J., Sudo K., Kondo S., Yoshida T., Shoji H., Shimoi T., Yonemori K, & Yamamoto N. (2023). Travel Time and Distance and Participation in Precision Oncology Trials at the National Cancer Center Hospital. JAMA Network Open, 6(9), e2333188.

Publication 2023

FoundationOne CDx OncoGuide NCC Oncopanel System FoundationOne Liquid CDx

Blood Cancer Cell free dna Counselors Genome Genotype Hybrid Medicine Oncologists Pathologists Patients Therapeutics Tumor

Top 5 similar protocols

Variable analysis

independent variables

Hybrid capture-based targeted DNA sequencing with FoundationOne CDx (Foundation Medicine)
OncoGuide NCC Oncopanel System (Sysmex Corporation)
In-house NGS testing
Cell-free DNA with FoundationOne Liquid CDx (Foundation Medicine) or Guardant360 CDx (Guardant Health)

dependent variables

Molecular profiling results

control variables

Discussion by regional molecular tumor boards (MTB) comprising medical oncologists, pediatric oncologists, pathologists, bioinformaticians, genome researchers, and genetic counselors
Reports containing clinical annotation and information regarding genotype-matched clinical trials from the Center for Cancer Genomics and Advanced Therapeutics national database

Annotations

Based on most similar protocols

Etiam vel ipsum. Morbi facilisis vestibulum nisl. Praesent cursus laoreet felis. Integer adipiscing pretium orci. Nulla facilisi. Quisque posuere bibendum purus. Nulla quam mauris, cursus eget, convallis ac, molestie non, enim. Aliquam congue. Quisque sagittis nonummy sapien. Proin molestie sem vitae urna. Maecenas lorem.

As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Revolutionizing how scientists
search and build protocols!