Metabolite Extraction and Mass Spectrometry Analysis
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Variable analysis
- Addition of labeled DMEM
- Metabolites harvested at various time points following addition of labeled DMEM
- Drying the samples
- Dissolving metabolites extracted from mock-treated plates in 300 μL of HPLC-grade water
- Dissolving metabolites extracted from infected plates in 600 μL of HPLC-grade water
- Volume of 10 μL of each metabolite extract analyzed via reverse-phase ion-pairing chromatography
- Mass spectrometer scan rate set to 1 Hz and resolving power to 100,000
- Mass spectrometer scanning m/z 85–1000 in the negative ion mode
- Chromatography gradient parameters
- Solvent A (97:3 water–methanol with 10 mM tributylamine and 15 mM acetic acid)
- Solvent B (methanol)
- Flow rate of 200 μL/min on a Synergy Hydro-RP column (100 mm × 2 mm, 2.5 μm particle size)
- Mock-treated plates (negative control)
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