Primer Design and qRT-PCR Analysis
Corresponding Organization : Hebei Agricultural University
Variable analysis
- Relative expression of AsCEP50 gene
- Threshold cycle (CT) values to determine fold change in transcript accumulation
- Actin as an internal reference gene for A. solani
- PP2A as a housekeeping gene in N. benthamiana
- Serial dilutions of cDNAs to detect primer specificity
- Extraction of RNAs using Easy Pure Plant RNA Kit
- CDNA synthesis using TransScript One-Step gDNA Removal and cDNA Synthesis SuperMix
- Amplification efficiency tested by serial dilution for all primers used in qPCR
- QRT-PCR performed under specific conditions (95°C for 30 s, followed by 40 cycles at 95°C for 5 s and 59°C for 30 s)
- Six biological and three technical replicates for each sample in all the qRT-PCR reactions
Annotations
Based on most similar protocols
As authors may omit details in methods from publication, our AI will look for missing critical information across the 5 most similar protocols.
About PubCompare
Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.
We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.
However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.
Ready to get started?
Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required
Revolutionizing how scientists
search and build protocols!